Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_05795 | Not Available | Positive | 1247180 - 1247989 | 31047.5 |
| nucleotidyl transferase abieii/abigii toxin family protein | DXC16_05800 | Not Available | Positive | 1247979 - 1249052 | 40681.8 |
| dna-binding protein | DXC16_05805 | Not Available | Positive | 1250407 - 1251282 | 35142.4 |
| site-specific integrase | DXC16_05810 | Not Available | Positive | 1251400 - 1252515 | 43883.9 |
| hypothetical protein | DXC16_05815 | Not Available | Positive | 1252695 - 1253693 | 37875.6 |
| dna-binding protein | DXC16_05820 | Not Available | Positive | 1253787 - 1254161 | 14328.4 |
| mobilization protein | DXC16_05825 | Not Available | Positive | 1254167 - 1255237 | 40323.1 |
| metalloproteinase | DXC16_05830 | Not Available | Positive | 1255559 - 1255987 | 16266.5 |
| relaxase | DXC16_05835 | Not Available | Positive | 1255984 - 1257192 | 46009.7 |
| hypothetical protein | DXC16_05840 | Not Available | Positive | 1257227 - 1257724 | 18730.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

