Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_05685 | Not Available | Negative | 1231869 - 1232324 | 17609.3 |
| hypothetical protein | DXC16_05690 | Not Available | Negative | 1232338 - 1233471 | 43202.9 |
| recombinase family protein | DXC16_05695 | Not Available | Positive | 1233782 - 1234438 | 25056.4 |
| duf1653 domain-containing protein | DXC16_05700 | Not Available | Positive | 1234444 - 1235244 | 31174.5 |
| hypothetical protein | DXC16_05705 | Not Available | Negative | 1235342 - 1235884 | 20646.9 |
| duf2958 domain-containing protein | DXC16_05710 | Not Available | Negative | 1235910 - 1236296 | 14604.3 |
| dna methylase | DXC16_05715 | Not Available | Positive | 1236672 - 1238165 | 56364.7 |
| hypothetical protein | DXC16_05720 | Not Available | Positive | 1238107 - 1238574 | 17589.0 |
| duf1273 family protein | DXC16_05725 | Not Available | Negative | 1238854 - 1239351 | 19095.9 |
| ribonucleotide-diphosphate reductase subunit alpha | DXC16_05730 | Not Available | Negative | 1239348 - 1239929 | 22044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

