Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_05575 | Not Available | Positive | 1207853 - 1208530 | 23006.8 |
| m23 family peptidase | DXC16_05580 | Not Available | Positive | 1208557 - 1209387 | 31421.8 |
| hypothetical protein | DXC16_05585 | Not Available | Positive | 1209411 - 1209692 | 11105.1 |
| hypothetical protein | DXC16_05590 | Not Available | Positive | 1209731 - 1211119 | 51528.7 |
| duf1738 domain-containing protein | DXC16_05595 | Not Available | Positive | 1211147 - 1213582 | 92695.3 |
| glucosaminidase | DXC16_05600 | Not Available | Positive | 1213595 - 1215175 | 58047.9 |
| hypothetical protein | DXC16_05605 | Not Available | Positive | 1215212 - 1215826 | 22616.9 |
| duf1738 domain-containing protein | DXC16_05610 | Not Available | Positive | 1215826 - 1217340 | 57806.1 |
| hypothetical protein | DXC16_05615 | Not Available | Positive | 1217540 - 1217917 | 14614.7 |
| duf2493 domain-containing protein | DXC16_05625 | Not Available | Negative | 1218712 - 1219152 | 16777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

