Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_00020 | Not Available | Positive | 2838 - 3047 | 7700.39 |
| ribonucleoside-diphosphate reductase subunit alpha | DXC16_00025 | Not Available | Positive | 3450 - 5969 | 95735.6 |
| ribonucleotide-diphosphate reductase subunit beta | DXC16_00030 | Not Available | Positive | 6132 - 7181 | 41347.9 |
| methylenetetrahydrofolate reductase | DXC16_00035 | Not Available | Negative | 7272 - 8225 | 35944.1 |
| hypothetical protein | DXC16_00045 | Not Available | Negative | 10934 - 11314 | 13813.3 |
| tonb-dependent receptor | DXC16_00050 | Not Available | Positive | 11753 - 13930 | 81222.5 |
| abc transporter substrate-binding protein | DXC16_00055 | Not Available | Positive | 13944 - 15101 | 43492.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 16766 - 16876 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 16955 - 19847 | Not Available |
| 1-deoxy-d-xylulose-5-phosphate synthase | DXC16_00060 | Not Available | Negative | 15209 - 16969 | 64543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

