Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thif | DXC16_05525 | Not Available | Positive | 1198580 - 1200304 | 66688.1 |
| hypothetical protein | DXC16_05530 | Not Available | Positive | 1200211 - 1200759 | 21137.1 |
| m23 family peptidase | DXC16_05535 | Not Available | Negative | 1200743 - 1201414 | 24989.4 |
| duf4099 domain-containing protein | DXC16_05540 | Not Available | Positive | 1201688 - 1202440 | 29136.4 |
| hypothetical protein | DXC16_05545 | Not Available | Positive | 1202474 - 1202683 | 8289.32 |
| hypothetical protein | DXC16_05550 | Not Available | Positive | 1202708 - 1204345 | 61472.9 |
| hypothetical protein | DXC16_05555 | Not Available | Positive | 1204371 - 1205843 | 56329.3 |
| ph domain-containing protein | DXC16_05560 | Not Available | Positive | 1205849 - 1206340 | 18814.2 |
| hypothetical protein | DXC16_05565 | Not Available | Positive | 1206321 - 1207076 | 28315.1 |
| hypothetical protein | DXC16_05570 | Not Available | Positive | 1207097 - 1207798 | 27129.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

