Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DXC16_05475 | Not Available | Positive | 1185138 - 1185890 | 26709.4 |
| hypothetical protein | DXC16_05480 | Not Available | Positive | 1185874 - 1187154 | 49078.9 |
| hypothetical protein | DXC16_05485 | Not Available | Positive | 1187158 - 1188258 | 41375.7 |
| duf1848 domain-containing protein | DXC16_05490 | Not Available | Positive | 1188264 - 1189331 | 41037.1 |
| recombinase recq | DXC16_05495 | Not Available | Positive | 1189328 - 1193833 | 172956.0 |
| duf842 domain-containing protein | DXC16_05500 | Not Available | Positive | 1193843 - 1194871 | 38211.4 |
| vwa domain-containing protein | DXC16_05505 | Not Available | Positive | 1194871 - 1195455 | 21634.5 |
| hypothetical protein | DXC16_05510 | Not Available | Positive | 1195568 - 1196431 | 32869.7 |
| patatin | DXC16_05515 | Not Available | Positive | 1196616 - 1197602 | 37015.7 |
| hypothetical protein | DXC16_05520 | Not Available | Positive | 1197607 - 1198587 | 37879.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

