Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DXC16_05425 | Not Available | Positive | 1169880 - 1170698 | 31571.7 |
| hypothetical protein | DXC16_05430 | Not Available | Positive | 1170728 - 1171375 | 24074.8 |
| hypothetical protein | DXC16_05435 | Not Available | Positive | 1171494 - 1173497 | 73510.7 |
| ompa family protein | DXC16_05440 | Not Available | Positive | 1173497 - 1174192 | 27088.3 |
| hypothetical protein | DXC16_05445 | Not Available | Positive | 1174192 - 1176042 | 71119.0 |
| atp-dependent helicase | DXC16_05450 | Not Available | Positive | 1176051 - 1178801 | 105194.0 |
| brex-1 system phosphatase pglz type a | DXC16_05455 | Not Available | Positive | 1178814 - 1181354 | 98134.2 |
| brex system lon protease-like protein brxl | DXC16_05460 | Not Available | Positive | 1181366 - 1183459 | 79331.1 |
| hypothetical protein | DXC16_05465 | Not Available | Positive | 1183463 - 1183822 | 13292.8 |
| serine/threonine protein kinase | DXC16_05470 | Not Available | Positive | 1183836 - 1185101 | 47732.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

