Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DXC16_05160 | Not Available | Negative | 1127918 - 1128577 | 24159.7 |
| duf4099 domain-containing protein | DXC16_05165 | Not Available | Positive | 1128799 - 1129557 | 28717.2 |
| hypothetical protein | DXC16_05170 | Not Available | Positive | 1129578 - 1129802 | 8625.97 |
| hypothetical protein | DXC16_05175 | Not Available | Positive | 1129828 - 1131396 | 59323.8 |
| hypothetical protein | DXC16_05180 | Not Available | Positive | 1131401 - 1133092 | 64633.8 |
| ph domain-containing protein | DXC16_05185 | Not Available | Positive | 1133105 - 1133590 | 18877.5 |
| hypothetical protein | DXC16_05190 | Not Available | Positive | 1133571 - 1134266 | 25635.7 |
| hypothetical protein | DXC16_05195 | Not Available | Positive | 1134279 - 1134965 | 26440.1 |
| hypothetical protein | DXC16_05200 | Not Available | Positive | 1134978 - 1135622 | 21915.4 |
| m23 family peptidase | DXC16_05205 | Not Available | Positive | 1135649 - 1136479 | 30999.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

