Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_05110 | Not Available | Negative | 1122953 - 1123174 | 8212.89 |
| hypothetical protein | DXC16_05115 | Not Available | Positive | 1123774 - 1123974 | 7677.28 |
| deaminase | DXC16_05120 | Not Available | Positive | 1124154 - 1124639 | 17483.0 |
| hypothetical protein | DXC16_05125 | Not Available | Negative | 1124692 - 1124868 | 6585.39 |
| duf1273 family protein | DXC16_05130 | Not Available | Negative | 1124981 - 1125484 | 18856.8 |
| ribonucleotide-diphosphate reductase subunit alpha | DXC16_05135 | Not Available | Negative | 1125486 - 1126052 | 21405.5 |
| hypothetical protein | DXC16_05140 | Not Available | Negative | 1126345 - 1126512 | 6396.83 |
| hypothetical protein | DXC16_05145 | Not Available | Negative | 1126513 - 1126743 | 8466.35 |
| hypothetical protein | DXC16_05150 | Not Available | Positive | 1126757 - 1126915 | 6423.01 |
| orotate phosphoribosyltransferase | DXC16_05155 | Not Available | Positive | 1127049 - 1127885 | 32602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

