Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_04580 | Not Available | Negative | 1001985 - 1003208 | 44775.1 |
| Capsid maturation protease | DXC16_04585 | Not Available | Negative | 1003219 - 1004256 | 38757.1 |
| dde transposase family protein | DXC16_04590 | Not Available | Positive | 1004455 - 1004901 | 16686.0 |
| Terminase | DXC16_04595 | Not Available | Positive | 1004903 - 1006471 | 60163.2 |
| Hypothetical protein | DXC16_04600 | Not Available | Positive | 1006490 - 1006915 | 16451.7 |
| Portal protein | DXC16_04605 | Not Available | Positive | 1006917 - 1008305 | 52744.3 |
| Structural protein | DXC16_04610 | Not Available | Positive | 1008323 - 1009738 | 54526.4 |
| methylmalonyl-coa carboxyltransferase | DXC16_00005 | Not Available | Positive | 1 - 420 | 15450.6 |
| putative transporter | DXC16_00010 | Not Available | Positive | 546 - 2234 | 60888.9 |
| hypothetical protein | DXC16_00015 | Not Available | Positive | 2254 - 2811 | 21451.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

