Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| swim zinc finger family protein | DXC44_04850 | Not Available | Positive | 1174660 - 1175991 | 50182.6 |
| hypothetical protein | DXC44_04855 | Not Available | Positive | 1175978 - 1177453 | 56240.3 |
| atpase | DXC44_04860 | Not Available | Positive | 1177468 - 1178547 | 39676.8 |
| hypothetical protein | DXC44_04865 | Not Available | Positive | 1178576 - 1180798 | 83019.6 |
| vwa domain-containing protein | DXC44_04870 | Not Available | Positive | 1180813 - 1181943 | 41488.2 |
| tetratricopeptide repeat protein | DXC44_04875 | Not Available | Positive | 1181950 - 1182375 | 16653.5 |
| hypothetical protein | DXC44_04880 | Not Available | Positive | 1182397 - 1183020 | 24247.2 |
| hypothetical protein | DXC44_04885 | Not Available | Positive | 1183173 - 1183913 | 28692.6 |
| hypothetical protein | DXC44_04890 | Not Available | Positive | 1183920 - 1184852 | 35598.3 |
| transposase | DXC44_04895 | Not Available | Positive | 1185427 - 1186785 | 53027.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

