Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DXC44_04750 | Not Available | Negative | 1150922 - 1152145 | 46572.7 |
| molybdenum abc transporter atp-binding protein | DXC44_04755 | Not Available | Positive | 1152607 - 1152942 | 12959.5 |
| hypothetical protein | DXC44_04760 | Not Available | Positive | 1152950 - 1153165 | 8116.46 |
| hypothetical protein | DXC44_04765 | Not Available | Positive | 1153177 - 1153398 | 8927.74 |
| pcfk-like protein | DXC44_04770 | Not Available | Positive | 1153422 - 1153627 | 8075.45 |
| fimbrillin family protein | DXC44_04775 | Not Available | Negative | 1153628 - 1154696 | 38554.0 |
| fimbrillin family protein | DXC44_04780 | Not Available | Negative | 1154817 - 1155848 | 36166.3 |
| hypothetical protein | DXC44_04785 | Not Available | Negative | 1156158 - 1157018 | 31268.4 |
| hypothetical protein | DXC44_04790 | Not Available | Negative | 1157022 - 1157600 | 21509.6 |
| arac family transcriptional regulator | DXC44_04795 | Not Available | Positive | 1157875 - 1159554 | 65481.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

