Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-acp synthase | DXC44_04545 | Not Available | Positive | 1092610 - 1094340 | 63634.1 |
| acyl carrier protein | DXC44_04550 | Not Available | Positive | 1094346 - 1094603 | 9574.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DXC44_04555 | Not Available | Positive | 1094600 - 1095790 | 42036.1 |
| 3-oxoacyl-acp synthase | DXC44_04560 | Not Available | Positive | 1095794 - 1096747 | 35335.4 |
| kila-n domain-containing protein | DXC44_04565 | Not Available | Positive | 1096861 - 1097715 | 33301.9 |
| polysaccharide deacetylase family protein | DXC44_04570 | Not Available | Positive | 1097766 - 1098458 | 26618.1 |
| outer membrane lipoprotein carrier protein lola | DXC44_04575 | Not Available | Positive | 1099202 - 1099837 | 24793.4 |
| hypothetical protein | DXC44_04580 | Not Available | Positive | 1099812 - 1100354 | 20765.7 |
| hydroxymyristoyl-acp dehydratase | DXC44_04585 | Not Available | Positive | 1100356 - 1100736 | 14362.7 |
| hypothetical protein | DXC44_04590 | Not Available | Positive | 1100845 - 1101129 | 9684.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

