Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | DXC44_04345 | Not Available | Negative | 1035047 - 1035316 | 10364.5 |
| hypothetical protein | DXC44_04350 | Not Available | Negative | 1035597 - 1035848 | 10083.2 |
| hypothetical protein | DXC44_04355 | Not Available | Positive | 1035826 - 1036020 | 7344.59 |
| translational gtpase typa | DXC44_04360 | Not Available | Positive | 1036087 - 1037889 | 67346.3 |
| proton-conducting membrane transporter | DXC44_04365 | Not Available | Negative | 1037950 - 1038600 | 23950.1 |
| phosphoenolpyruvate carboxykinase (atp) | DXC44_04370 | Not Available | Negative | 1038706 - 1040313 | 59092.1 |
| uracil phosphoribosyltransferase | DXC44_04375 | Not Available | Positive | 1040574 - 1041233 | 24410.4 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DXC44_04380 | Not Available | Negative | 1041390 - 1042394 | 36538.8 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DXC44_04385 | Not Available | Negative | 1042418 - 1044265 | 66277.6 |
| Trna-arg | Not Available | Not Available | Positive | 1044676 - 1044750 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

