Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | DXC44_03940 | Not Available | Negative | 925327 - 925518 | 7526.36 |
| aminopeptidase p family protein | DXC44_03945 | Not Available | Positive | 925687 - 927468 | 66952.2 |
| gamma carbonic anhydrase family protein | DXC44_03950 | Not Available | Positive | 927478 - 928002 | 18518.4 |
| porin family protein | DXC44_03955 | Not Available | Positive | 928048 - 928539 | 18002.5 |
| n-acetyltransferase | DXC44_03960 | Not Available | Positive | 929066 - 929602 | 20779.9 |
| dna-binding response regulator | DXC44_03965 | Not Available | Negative | 929653 - 930354 | 26554.5 |
| sensor histidine kinase | DXC44_03970 | Not Available | Negative | 930379 - 931764 | 53386.8 |
| hypothetical protein | DXC44_03975 | Not Available | Positive | 931886 - 934183 | 87729.8 |
| pdz domain-containing protein | DXC44_03980 | Not Available | Negative | 934249 - 935943 | 63106.7 |
| adenosine kinase | DXC44_03985 | Not Available | Negative | 935987 - 936973 | 35238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

