Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination factor nusg | DXC44_03890 | Not Available | Negative | 921432 - 921974 | 20140.3 |
| preprotein translocase subunit sece | DXC44_03895 | Not Available | Negative | 921988 - 922182 | 7402.06 |
| Trna-trp | Not Available | Not Available | Positive | 922196 - 922271 | Not Available |
| elongation factor tu | DXC44_03905 | Not Available | Negative | 922329 - 923513 | 43565.6 |
| Trna-thr | Not Available | Not Available | Positive | 923565 - 923636 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 923649 - 923721 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 923755 - 923837 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 923878 - 923954 | Not Available |
| ribosome-associated translation inhibitor raia | DXC44_03930 | Not Available | Negative | 924053 - 924352 | 11325.7 |
| recombinase | DXC44_03935 | Not Available | Negative | 924368 - 925249 | 34003.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

