Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | DXC44_03840 | Not Available | Negative | 907093 - 909210 | 77460.5 |
| 30s ribosomal protein s7 | DXC44_03845 | Not Available | Negative | 909242 - 909718 | 18204.1 |
| 30s ribosomal protein s12 | DXC44_03850 | Not Available | Negative | 909867 - 910280 | 14994.4 |
| duf3467 domain-containing protein | DXC44_03855 | Not Available | Negative | 910469 - 910810 | 12561.0 |
| dna-directed rna polymerase subunit beta' | DXC44_03860 | Not Available | Negative | 911019 - 915305 | 158848.0 |
| dna-directed rna polymerase subunit beta | DXC44_03865 | Not Available | Negative | 915344 - 919156 | 142493.0 |
| 50s ribosomal protein l7/l12 | DXC44_03870 | Not Available | Negative | 919259 - 919633 | 12654.2 |
| 50s ribosomal protein l10 | DXC44_03875 | Not Available | Negative | 919680 - 920198 | 18678.8 |
| 50s ribosomal protein l1 | DXC44_03880 | Not Available | Negative | 920214 - 920912 | 24935.6 |
| 50s ribosomal protein l11 | DXC44_03885 | Not Available | Negative | 920928 - 921371 | 15797.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

