Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | DXC44_03790 | Not Available | Negative | 902164 - 902358 | 7453.1 |
| 50s ribosomal protein l16 | DXC44_03795 | Not Available | Negative | 902365 - 902799 | 16206.8 |
| 30s ribosomal protein s3 | DXC44_03800 | Not Available | Negative | 902821 - 903552 | 27103.1 |
| 50s ribosomal protein l22 | DXC44_03805 | Not Available | Negative | 903559 - 903969 | 15484.9 |
| 30s ribosomal protein s19 | DXC44_03810 | Not Available | Negative | 904006 - 904275 | 9895.23 |
| 50s ribosomal protein l2 | DXC44_03815 | Not Available | Negative | 904298 - 905119 | 29634.1 |
| 50s ribosomal protein l23 | DXC44_03820 | Not Available | Negative | 905125 - 905415 | 10804.2 |
| 50s ribosomal protein l4 | DXC44_03825 | Not Available | Negative | 905437 - 906063 | 23045.8 |
| 50s ribosomal protein l3 | DXC44_03830 | Not Available | Negative | 906063 - 906680 | 21900.8 |
| 30s ribosomal protein s10 | DXC44_03835 | Not Available | Negative | 906702 - 907007 | 11419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

