Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l30 | DXC44_03740 | Not Available | Negative | 898212 - 898388 | 6433.21 |
| 30s ribosomal protein s5 | DXC44_03745 | Not Available | Negative | 898398 - 898916 | 17941.0 |
| 50s ribosomal protein l18 | DXC44_03750 | Not Available | Negative | 898920 - 899261 | 12645.5 |
| 50s ribosomal protein l6 | DXC44_03755 | Not Available | Negative | 899283 - 899852 | 20910.5 |
| 30s ribosomal protein s8 | DXC44_03760 | Not Available | Negative | 899867 - 900262 | 14565.0 |
| 30s ribosomal protein s14 | DXC44_03765 | Not Available | Negative | 900320 - 900619 | 11077.7 |
| 50s ribosomal protein l5 | DXC44_03770 | Not Available | Negative | 900626 - 901183 | 20860.8 |
| 50s ribosomal protein l24 | DXC44_03775 | Not Available | Negative | 901183 - 901506 | 11658.2 |
| 50s ribosomal protein l14 | DXC44_03780 | Not Available | Negative | 901527 - 901892 | 13058.1 |
| 30s ribosomal protein s17 | DXC44_03785 | Not Available | Negative | 901895 - 902152 | 9981.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

