Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | DXC44_03690 | Not Available | Negative | 892192 - 892680 | 17965.6 |
| dna-directed rna polymerase subunit alpha | DXC44_03695 | Not Available | Negative | 892684 - 893676 | 37535.1 |
| 30s ribosomal protein s4 | DXC44_03700 | Not Available | Negative | 893688 - 894293 | 22540.2 |
| 30s ribosomal protein s11 | DXC44_03705 | Not Available | Negative | 894410 - 894799 | 13878.8 |
| 30s ribosomal protein s13 | DXC44_03710 | Not Available | Negative | 894811 - 895191 | 14121.3 |
| 50s ribosomal protein l36 | DXC44_03715 | Not Available | Negative | 895225 - 895341 | 4586.82 |
| translation initiation factor if-1 | DXC44_03720 | Not Available | Negative | 895356 - 895574 | 8235.14 |
| type i methionyl aminopeptidase | DXC44_03725 | Not Available | Negative | 895576 - 896373 | 29142.0 |
| preprotein translocase subunit secy | DXC44_03730 | Not Available | Negative | 896384 - 897730 | 49282.7 |
| 50s ribosomal protein l15 | DXC44_03735 | Not Available | Negative | 897735 - 898181 | 15681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

