Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | DXC44_03640 | Not Available | Positive | 879032 - 880456 | 53405.0 |
| hypothetical protein | DXC44_03645 | Not Available | Positive | 880469 - 882700 | 85680.7 |
| linear amide c-n hydrolase | DXC44_03650 | Not Available | Positive | 882914 - 883993 | 39662.6 |
| Trna-lys | Not Available | Not Available | Positive | 884164 - 884239 | Not Available |
| site-specific integrase | DXC44_03660 | Not Available | Positive | 884334 - 885533 | 45847.6 |
| hypothetical protein | DXC44_03665 | Not Available | Positive | 886098 - 888017 | 74894.6 |
| dna repair protein | DXC44_03670 | Not Available | Positive | 888366 - 888812 | 16590.8 |
| serine recombinase | DXC44_03675 | Not Available | Positive | 888917 - 889591 | 25109.9 |
| hypothetical protein | DXC44_03680 | Not Available | Positive | 890213 - 891151 | 35378.6 |
| hypothetical protein | DXC44_03685 | Not Available | Positive | 891174 - 891629 | 17023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

