Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DXC44_03440 | Not Available | Negative | 818692 - 819510 | 30951.9 |
| colanic acid biosynthesis acetyltransferase wcaf | DXC44_03445 | Not Available | Negative | 819527 - 820081 | 20445.8 |
| glycosyltransferase | DXC44_03450 | Not Available | Negative | 820078 - 821166 | 42078.2 |
| acyltransferase | DXC44_03455 | Not Available | Negative | 821174 - 821833 | 25050.9 |
| glycosyltransferase family 2 protein | DXC44_03460 | Not Available | Negative | 821846 - 822841 | 39337.5 |
| transporter | DXC44_03465 | Not Available | Negative | 822834 - 824390 | 60062.4 |
| acyltransferase | DXC44_03470 | Not Available | Negative | 824398 - 825087 | 25682.3 |
| glycosyltransferase family 1 protein | DXC44_03475 | Not Available | Negative | 825132 - 826259 | 43839.8 |
| glycosyltransferase | DXC44_03480 | Not Available | Negative | 826434 - 827681 | 49078.8 |
| hypothetical protein | DXC44_03485 | Not Available | Negative | 827723 - 829048 | 51365.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

