Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DXC44_03340 | Not Available | Negative | 790461 - 791414 | 36346.1 |
| duf4199 domain-containing protein | DXC44_03345 | Not Available | Negative | 791418 - 791951 | 20508.6 |
| hypothetical protein | DXC44_03350 | Not Available | Negative | 791958 - 792206 | 9849.11 |
| Trna-thr | Not Available | Not Available | Positive | 792211 - 792284 | Not Available |
| atp-dependent dna helicase recq | DXC44_03360 | Not Available | Positive | 792394 - 794811 | 91680.0 |
| hypothetical protein | DXC44_03365 | Not Available | Negative | 794914 - 795120 | 8068.73 |
| hypothetical protein | DXC44_03370 | Not Available | Negative | 795160 - 795360 | 7320.06 |
| aaa family atpase | DXC44_03375 | Not Available | Positive | 796008 - 797576 | 60578.0 |
| phosphopyruvate hydratase | DXC44_03380 | Not Available | Negative | 797681 - 798976 | 46813.8 |
| glycoside hydrolase family 95 protein | DXC44_03385 | Not Available | Positive | 799142 - 801586 | 92073.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

