Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_03135 | Not Available | Positive | 756485 - 756778 | 11293.8 |
| pirin family protein | DXC44_03140 | Not Available | Negative | 757001 - 757630 | 23571.9 |
| dde transposase | DXC44_03145 | Not Available | Negative | 757659 - 758663 | 39032.1 |
| transposase family protein | DXC44_03150 | Not Available | Negative | 758674 - 759024 | 13836.2 |
| Trna-gly | Not Available | Not Available | Positive | 759313 - 759410 | Not Available |
| hypothetical protein | DXC44_03165 | Not Available | Negative | 759786 - 759953 | 6621.8 |
| hypothetical protein | DXC44_03170 | Not Available | Negative | 759963 - 761459 | 60172.1 |
| hypothetical protein | DXC44_03175 | Not Available | Negative | 761703 - 762122 | 16176.8 |
| hypothetical protein | DXC44_03180 | Not Available | Negative | 762143 - 762778 | 24782.1 |
| penicillin-binding protein | DXC44_03185 | Not Available | Negative | 762778 - 763638 | 30903.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

