Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_02825 | Not Available | Positive | 687533 - 687907 | 14035.0 |
| dihydroxy-acid dehydratase | DXC44_02830 | Not Available | Positive | 688318 - 690120 | 64045.1 |
| biosynthetic-type acetolactate synthase large subunit | DXC44_02835 | Not Available | Positive | 690220 - 691917 | 61841.6 |
| acetolactate synthase small subunit | DXC44_02840 | Not Available | Positive | 691928 - 692482 | 21284.6 |
| acyl-[acyl-carrier-protein] thioesterase | DXC44_02845 | Not Available | Positive | 692482 - 693225 | 28460.1 |
| ketol-acid reductoisomerase | DXC44_02850 | Not Available | Positive | 693260 - 694303 | 38168.5 |
| energy transducer tonb | DXC44_02855 | Not Available | Positive | 694431 - 695516 | 41924.5 |
| peptidylprolyl isomerase | DXC44_02860 | Not Available | Negative | 696147 - 698279 | 78893.4 |
| hlyc/corc family transporter | DXC44_02865 | Not Available | Negative | 698385 - 699644 | 47665.1 |
| lps export abc transporter periplasmic protein lptc | DXC44_02870 | Not Available | Negative | 699658 - 700302 | 24876.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

