Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_02625 | Not Available | Negative | 644518 - 645219 | 25285.6 |
| duf4375 domain-containing protein | DXC44_02630 | Not Available | Positive | 645456 - 645965 | 19574.0 |
| sodium:glutamate symporter | DXC44_02635 | Not Available | Negative | 646135 - 647514 | 49789.1 |
| hypothetical protein | DXC44_02640 | Not Available | Negative | 647729 - 648343 | 23057.4 |
| hypothetical protein | DXC44_02645 | Not Available | Positive | 648691 - 649446 | 27663.9 |
| hypothetical protein | DXC44_02650 | Not Available | Negative | 649560 - 649775 | 8509.12 |
| hypothetical protein | DXC44_02655 | Not Available | Negative | 649720 - 649842 | 4290.01 |
| hypothetical protein | DXC44_02660 | Not Available | Negative | 650146 - 651852 | 63804.7 |
| fimbrillin family protein | DXC44_02665 | Not Available | Negative | 651918 - 652988 | 39465.8 |
| fimbrillin family protein | DXC44_02670 | Not Available | Negative | 653118 - 654257 | 42276.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

