Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_02575 | Not Available | Negative | 632779 - 633066 | 11068.8 |
| tonb-dependent receptor | DXC44_02580 | Not Available | Positive | 633525 - 636260 | 103929.0 |
| duf4876 domain-containing protein | DXC44_02585 | Not Available | Positive | 636282 - 637496 | 44734.4 |
| hypothetical protein | DXC44_02590 | Not Available | Positive | 637511 - 639085 | 58494.8 |
| hypothetical protein | DXC44_02595 | Not Available | Positive | 639106 - 639690 | 20936.8 |
| peptidase | DXC44_02600 | Not Available | Positive | 639674 - 640249 | 21616.7 |
| abc transporter atp-binding protein | DXC44_02605 | Not Available | Positive | 640277 - 641164 | 33830.1 |
| hypothetical protein | DXC44_02610 | Not Available | Positive | 641188 - 641859 | 25628.6 |
| duf4857 domain-containing protein | DXC44_02615 | Not Available | Positive | 641892 - 642920 | 39445.4 |
| gggtgrt protein | DXC44_02620 | Not Available | Negative | 643489 - 644499 | 35757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

