Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase family protein | DXC44_02475 | Not Available | Positive | 616903 - 617721 | 30705.9 |
| sdr family oxidoreductase | DXC44_02480 | Not Available | Positive | 617726 - 618484 | 27233.0 |
| alpha-amlyase | DXC44_02485 | Not Available | Negative | 618580 - 618828 | 9267.24 |
| sodium ion-translocating decarboxylase subunit beta | DXC44_02490 | Not Available | Negative | 619003 - 620163 | 40880.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DXC44_02495 | Not Available | Negative | 620165 - 620596 | 15152.5 |
| lamin tail domain-containing protein | DXC44_02500 | Not Available | Negative | 620620 - 621549 | 34102.0 |
| acyl-coa carboxylase subunit beta | DXC44_02505 | Not Available | Negative | 621577 - 623130 | 56473.9 |
| methylmalonyl-coa epimerase | DXC44_02510 | Not Available | Negative | 623233 - 623646 | 14910.1 |
| gnat family n-acetyltransferase | DXC44_02515 | Not Available | Negative | 623803 - 624825 | 40006.0 |
| nad(p)h nitroreductase | DXC44_02520 | Not Available | Positive | 624871 - 625407 | 20051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

