Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain TF05-18
Accession NumberQSSN00000000.1
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DXC44_00080 | Not Available | + | 26376 - 26618 | 8923.97 |
| glucuronyl hydrolase | DXC44_00085 | Not Available | - | 26620 - 27846 | 46657.1 |
| nadh-quinone oxidoreductase subunit n | DXC44_00090 | Not Available | - | 28022 - 29443 | 52268.5 |
| nadh-quinone oxidoreductase subunit m | DXC44_00095 | Not Available | - | 29475 - 30956 | 53794.6 |
| nadh-quinone oxidoreductase subunit l | DXC44_00100 | Not Available | - | 31010 - 32911 | 70328.2 |
| nadh-quinone oxidoreductase subunit nuok | DXC44_00105 | Not Available | - | 32914 - 33222 | 11758.6 |
| nadh-quinone oxidoreductase subunit j | DXC44_00110 | Not Available | - | 33228 - 33731 | 18224.2 |
| nadh-quinone oxidoreductase subunit i | DXC44_00115 | Not Available | - | 33747 - 34199 | 16944.7 |
| nadh-quinone oxidoreductase subunit h | DXC44_00120 | Not Available | - | 34199 - 35275 | 40265.7 |
| nadh-quinone oxidoreductase subunit c/d | DXC44_00125 | Not Available | - | 35399 - 36958 | 59743.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
