Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DXC44_02365 | Not Available | Negative | 594381 - 594932 | 21576.8 |
| endonuclease muts2 | DXC44_02370 | Not Available | Negative | 595012 - 597516 | 95170.6 |
| Trna-ser | Not Available | Not Available | Positive | 597665 - 597752 | Not Available |
| helicase iv | DXC44_02380 | Not Available | Negative | 597910 - 600525 | 100873.0 |
| hypothetical protein | DXC44_02385 | Not Available | Negative | 600593 - 601252 | 25073.6 |
| hypothetical protein | DXC44_02390 | Not Available | Negative | 601272 - 601769 | 18084.0 |
| mobilization protein | DXC44_02400 | Not Available | Negative | 602076 - 603479 | 54551.3 |
| dna primase | DXC44_02405 | Not Available | Negative | 603686 - 604642 | 36556.1 |
| mobilization protein | DXC44_02410 | Not Available | Negative | 604855 - 605931 | 41092.5 |
| duf3853 family protein | DXC44_02415 | Not Available | Negative | 605946 - 606254 | 11386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

