Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DXC44_02110 | Not Available | Positive | 532202 - 532744 | 19974.5 |
| glycosyltransferase family 1 protein | DXC44_02115 | Not Available | Positive | 532841 - 533971 | 43854.1 |
| hypothetical protein | DXC44_02120 | Not Available | Positive | 534014 - 534235 | 8825.62 |
| hypothetical protein | DXC44_02125 | Not Available | Positive | 534263 - 535072 | 31213.2 |
| glucose-1-phosphate thymidylyltransferase | DXC44_02130 | Not Available | Positive | 535094 - 535999 | 33625.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DXC44_02135 | Not Available | Positive | 536003 - 536575 | 21745.9 |
| dtdp-4-dehydrorhamnose reductase | DXC44_02140 | Not Available | Positive | 536575 - 537435 | 32219.3 |
| dtdp-glucose 4,6-dehydratase | DXC44_02145 | Not Available | Positive | 537460 - 538536 | 41496.0 |
| undecaprenyl-phosphate glucose phosphotransferase | DXC44_02150 | Not Available | Positive | 538536 - 540011 | 56984.1 |
| hypothetical protein | DXC44_02155 | Not Available | Positive | 540043 - 540258 | 7570.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

