Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trad | DXC44_21940 | Not Available | Positive | 5058994 - 5059593 | 22304.6 |
| atp-dependent helicase | DXC44_21945 | Not Available | Positive | 5059639 - 5060266 | 23410.0 |
| conjugal transfer protein trad | DXC44_21950 | Not Available | Negative | 5060267 - 5060442 | 6882.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DXC44_21960 | Not Available | Positive | 5060895 - 5061143 | 8995.94 |
| methylmalonyl-coa carboxyltransferase | DXC44_21965 | Not Available | Positive | 5061146 - 5061423 | 10384.5 |
| trag family conjugative transposon atpase | DXC44_21970 | Not Available | Negative | 5061424 - 5061934 | 20026.1 |
| methylmalonyl-coa carboxyltransferase | DXC44_21975 | Not Available | Positive | 5061935 - 5062435 | 17739.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

