Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3873 domain-containing protein | DXC44_21765 | Not Available | Positive | 5036758 - 5036988 | 8864.54 |
| hypothetical protein | DXC44_21770 | Not Available | Positive | 5036928 - 5037233 | 11383.3 |
| hypothetical protein | DXC44_21775 | Not Available | Positive | 5037287 - 5037595 | 11865.5 |
| hypothetical protein | DXC44_21780 | Not Available | Positive | 5037760 - 5038395 | 24433.0 |
| lysozyme | DXC44_21785 | Not Available | Negative | 5038468 - 5038677 | 7957.99 |
| trag family conjugative transposon atpase | DXC44_21790 | Not Available | Positive | 5038678 - 5039610 | 36236.5 |
| duf3876 domain-containing protein | DXC44_21795 | Not Available | Positive | 5039648 - 5040031 | 14460.4 |
| duf4141 domain-containing protein | DXC44_21800 | Not Available | Positive | 5040062 - 5040691 | 24171.3 |
| conjugative transposon protein traj | DXC44_21805 | Not Available | Positive | 5040695 - 5041587 | 33653.6 |
| is66 family transposase | DXC44_21810 | Not Available | Negative | 5041647 - 5043212 | 60557.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

