Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXC44_21265 | Not Available | Negative | 4932593 - 4934578 | 74157.0 |
| tonb-dependent receptor | DXC44_21270 | Not Available | Negative | 4934594 - 4937794 | 118397.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC44_21275 | Not Available | Negative | 4938287 - 4940173 | 72167.2 |
| atp-dependent helicase | DXC44_21285 | Not Available | Positive | 4943427 - 4944618 | 45142.4 |
| na(+)-translocating nadh-quinone reductase subunit a | DXC44_21290 | Not Available | Positive | 4944863 - 4946212 | 49524.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DXC44_21295 | Not Available | Positive | 4946241 - 4947449 | 43554.0 |
| na(+)-translocating nadh-quinone reductase subunit c | DXC44_21300 | Not Available | Positive | 4947463 - 4948137 | 24676.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DXC44_21305 | Not Available | Positive | 4948156 - 4948794 | 23121.2 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DXC44_21310 | Not Available | Positive | 4948819 - 4949415 | 21276.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | DXC44_21315 | Not Available | Positive | 4949434 - 4950708 | 47059.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

