Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_21050 | Not Available | Positive | 4870264 - 4873236 | 110630.0 |
| conjugal transfer protein trad | DXC44_21055 | Not Available | Negative | 4873300 - 4873475 | 6852.5 |
| duf3408 domain-containing protein | DXC44_21060 | Not Available | Negative | 4873472 - 4873834 | 13686.4 |
| duf3408 domain-containing protein | DXC44_21065 | Not Available | Negative | 4873859 - 4874308 | 16982.9 |
| para family protein | DXC44_21070 | Not Available | Negative | 4874314 - 4875069 | 28206.2 |
| hypothetical protein | DXC44_21080 | Not Available | Positive | 4875345 - 4875524 | 6223.55 |
| moba protein | DXC44_21085 | Not Available | Positive | 4875795 - 4876220 | 16812.4 |
| relaxase | DXC44_21090 | Not Available | Positive | 4876199 - 4877449 | 46952.2 |
| conjugal transfer protein trag | DXC44_21095 | Not Available | Positive | 4877482 - 4879491 | 76464.9 |
| hypothetical protein | DXC44_21100 | Not Available | Negative | 4879605 - 4881599 | 78238.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

