Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 4781745 - 4781815 | Not Available |
| flavin reductase family protein | DXC44_20645 | Not Available | Negative | 4781946 - 4782452 | 19380.2 |
| dna mismatch repair protein muts | DXC44_20650 | Not Available | Positive | 4782571 - 4785183 | 97854.5 |
| glycoside hydrolase | DXC44_20655 | Not Available | Positive | 4785233 - 4787212 | 75347.0 |
| hypothetical protein | DXC44_20660 | Not Available | Negative | 4787175 - 4787366 | 6917.68 |
| port family protein | DXC44_20665 | Not Available | Positive | 4787419 - 4788006 | 21953.3 |
| hypothetical protein | DXC44_20670 | Not Available | Positive | 4788049 - 4789716 | 64165.7 |
| tetratricopeptide repeat protein | DXC44_20675 | Not Available | Positive | 4789825 - 4791480 | 63774.9 |
| hypothetical protein | DXC44_20680 | Not Available | Positive | 4791597 - 4791842 | 9250.33 |
| porin family protein | DXC44_20685 | Not Available | Positive | 4792150 - 4792848 | 25700.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

