Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_20535 | Not Available | Negative | 4762491 - 4762736 | 9233.87 |
| peptidase s51 | DXC44_20540 | Not Available | Positive | 4763028 - 4763654 | 23462.7 |
| hypothetical protein | DXC44_20545 | Not Available | Negative | 4763948 - 4764691 | 28250.1 |
| mobilization protein | DXC44_20550 | Not Available | Negative | 4764736 - 4765686 | 36231.3 |
| plasmid mobilization relaxosome protein mobc | DXC44_20555 | Not Available | Negative | 4765683 - 4766096 | 15525.8 |
| duf3408 domain-containing protein | DXC44_20560 | Not Available | Negative | 4766281 - 4766760 | 18354.6 |
| dna-binding protein | DXC44_20570 | Not Available | Positive | 4767158 - 4767469 | 12274.7 |
| dna-binding protein | DXC44_20575 | Not Available | Positive | 4767552 - 4767860 | 12278.0 |
| acyltransferase | DXC44_20580 | Not Available | Negative | 4768250 - 4769392 | 43799.9 |
| metallophosphoesterase | DXC44_20585 | Not Available | Negative | 4769407 - 4770237 | 31429.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

