Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4252 domain-containing protein | DXC44_20325 | Not Available | Positive | 4710891 - 4711349 | 17333.2 |
| hypothetical protein | DXC44_20330 | Not Available | Negative | 4711604 - 4712275 | 23981.6 |
| hypothetical protein | DXC44_20335 | Not Available | Positive | 4712606 - 4714405 | 68617.8 |
| hypothetical protein | DXC44_20340 | Not Available | Negative | 4714500 - 4715039 | 19772.7 |
| hypothetical protein | DXC44_20345 | Not Available | Negative | 4715158 - 4715583 | 15762.0 |
| 4fe-4s dicluster domain-containing protein | DXC44_20350 | Not Available | Negative | 4715845 - 4716012 | 5717.65 |
| beta-n-acetylglucosaminidase | DXC44_20355 | Not Available | Negative | 4716130 - 4719108 | 111538.0 |
| bifunctional metallophosphatase/5'-nucleotidase | DXC44_20360 | Not Available | Negative | 4719154 - 4719996 | 31300.3 |
| 5'-nucleotidase | DXC44_20365 | Not Available | Negative | 4720008 - 4720787 | 27870.5 |
| 50s ribosomal protein l19 | DXC44_20370 | Not Available | Positive | 4720985 - 4721338 | 13130.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

