Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DXC44_20200 | Not Available | Negative | 4681775 - 4682716 | 36115.9 |
| sdr family oxidoreductase | DXC44_20205 | Not Available | Negative | 4682759 - 4683634 | 33009.3 |
| zn-dependent alcohol dehydrogenase | DXC44_20220 | Not Available | Positive | 4685208 - 4686254 | 38299.2 |
| rna methyltransferase | DXC44_20225 | Not Available | Positive | 4686290 - 4687096 | 29086.6 |
| hypothetical protein | DXC44_20230 | Not Available | Positive | 4687109 - 4687297 | 7343.24 |
| alpha-galactosidase | DXC44_20235 | Not Available | Negative | 4688551 - 4690707 | 82545.3 |
| hypothetical protein | DXC44_20240 | Not Available | Positive | 4690960 - 4694427 | 133338.0 |
| atp-binding protein | DXC44_20255 | Not Available | Negative | 4696072 - 4697343 | 49393.9 |
| iron-containing alcohol dehydrogenase | DXC44_20260 | Not Available | Positive | 4697567 - 4698739 | 42892.9 |
| creatininase family protein | DXC44_20265 | Not Available | Positive | 4698739 - 4699494 | 28518.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

