Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | DXC44_01835 | Not Available | Positive | 471252 - 472798 | 58273.0 |
| hypothetical protein | DXC44_01840 | Not Available | Positive | 472857 - 473024 | 6488.94 |
| hypothetical protein | DXC44_01865 | Not Available | Negative | 475958 - 476356 | 15536.1 |
| hypothetical protein | DXC44_01870 | Not Available | Positive | 477066 - 478409 | 51653.8 |
| hypothetical protein | DXC44_01875 | Not Available | Positive | 478940 - 479125 | 6642.76 |
| hypothetical protein | DXC44_01880 | Not Available | Positive | 479155 - 479397 | 9283.02 |
| lytic transglycosylase f | DXC44_01885 | Not Available | Negative | 479413 - 480792 | 52065.1 |
| uridine kinase | DXC44_01890 | Not Available | Negative | 480789 - 481400 | 23271.3 |
| dabb family protein | DXC44_01895 | Not Available | Positive | 481506 - 481805 | 11090.4 |
| paai family thioesterase | DXC44_01900 | Not Available | Positive | 481816 - 482307 | 18785.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

