Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | DXC44_19975 | Not Available | Positive | 4625659 - 4627023 | 49221.4 |
| helix-hairpin-helix domain-containing protein | DXC44_19980 | Not Available | Positive | 4627031 - 4627933 | 35330.7 |
| alkaline phosphatase | DXC44_19985 | Not Available | Negative | 4627930 - 4629348 | 51615.1 |
| hypothetical protein | DXC44_19990 | Not Available | Positive | 4629441 - 4629635 | 7532.48 |
| hypothetical protein | DXC44_19995 | Not Available | Positive | 4629652 - 4630152 | 19273.6 |
| hypothetical protein | DXC44_20005 | Not Available | Positive | 4630508 - 4630747 | 8779.99 |
| Trna-thr | Not Available | Not Available | Positive | 4631150 - 4631225 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | DXC44_20015 | Not Available | Negative | 4631250 - 4632074 | 31853.4 |
| hypothetical protein | DXC44_20020 | Not Available | Negative | 4632148 - 4632366 | 8844.55 |
| hypothetical protein | DXC44_20025 | Not Available | Negative | 4632324 - 4632605 | 11031.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

