Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DXC44_19665 | Not Available | Negative | 4556451 - 4557581 | 44133.5 |
| glycosyltransferase family 1 protein | DXC44_19670 | Not Available | Negative | 4557854 - 4558948 | 42796.4 |
| glycosyltransferase family 1 protein | DXC44_19675 | Not Available | Negative | 4558945 - 4560087 | 43495.6 |
| hypothetical protein | DXC44_19680 | Not Available | Negative | 4560356 - 4561156 | 32114.1 |
| haloacid dehalogenase-like hydrolase | DXC44_19685 | Not Available | Negative | 4561153 - 4561827 | 26554.1 |
| glycosyltransferase | DXC44_19690 | Not Available | Negative | 4561800 - 4562582 | 30345.6 |
| hypothetical protein | DXC44_19695 | Not Available | Negative | 4562594 - 4563916 | 50258.8 |
| glycosyltransferase family 2 protein | DXC44_19700 | Not Available | Negative | 4564030 - 4565076 | 40398.6 |
| glycosyltransferase family 2 protein | DXC44_19705 | Not Available | Negative | 4565123 - 4566133 | 39292.2 |
| flippase | DXC44_19710 | Not Available | Negative | 4566130 - 4567548 | 52807.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

