Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_19500 | Not Available | Positive | 4525544 - 4526230 | 27293.1 |
| hypothetical protein | DXC44_19510 | Not Available | Positive | 4526896 - 4527312 | 16079.6 |
| hypothetical protein | DXC44_19515 | Not Available | Positive | 4527407 - 4527620 | 8356.49 |
| hypothetical protein | DXC44_19520 | Not Available | Positive | 4527879 - 4528727 | 33279.5 |
| Trna-pseudo | Not Available | Not Available | Positive | 4529303 - 4529376 | Not Available |
| site-specific integrase | DXC44_19525 | Not Available | Positive | 4529620 - 4530855 | 47783.7 |
| hypothetical protein | DXC44_19530 | Not Available | Positive | 4530858 - 4531232 | 14236.4 |
| dna-binding protein | DXC44_19535 | Not Available | Negative | 4531439 - 4531744 | 11947.3 |
| dna-binding protein | DXC44_19540 | Not Available | Negative | 4531790 - 4532101 | 12347.9 |
| hypothetical protein | DXC44_19545 | Not Available | Negative | 4532638 - 4533423 | 30206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

