Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | DXC44_19445 | Not Available | Positive | 4514695 - 4515504 | 29954.3 |
| thiamine-phosphate kinase | DXC44_19450 | Not Available | Positive | 4515509 - 4516549 | 38227.8 |
| Trna-phe | Not Available | Not Available | Positive | 4516667 - 4516739 | Not Available |
| site-specific integrase | DXC44_19460 | Not Available | Positive | 4516874 - 4518073 | 46486.4 |
| hypothetical protein | DXC44_19465 | Not Available | Positive | 4518145 - 4519095 | 36875.1 |
| hypothetical protein | DXC44_19470 | Not Available | Positive | 4519513 - 4520040 | 20290.2 |
| hypothetical protein | DXC44_19475 | Not Available | Positive | 4520111 - 4521913 | 70446.4 |
| hypothetical protein | DXC44_19480 | Not Available | Positive | 4522003 - 4522692 | 26738.5 |
| duf3871 family protein | DXC44_19485 | Not Available | Positive | 4523022 - 4524035 | 38303.9 |
| site-specific integrase | DXC44_19490 | Not Available | Positive | 4524344 - 4524931 | 22448.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

