Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DXC44_19345 | Not Available | Negative | 4489621 - 4490646 | 37886.1 |
| glsb/yeaq/ymge family stress response membrane protein | DXC44_19350 | Not Available | Positive | 4490886 - 4491137 | 8688.23 |
| tolc family protein | DXC44_19355 | Not Available | Negative | 4491226 - 4492683 | 54832.0 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DXC44_19360 | Not Available | Negative | 4492661 - 4495810 | 115634.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXC44_19365 | Not Available | Negative | 4495823 - 4496974 | 43842.2 |
| hypothetical protein | DXC44_19370 | Not Available | Negative | 4497097 - 4497519 | 16008.7 |
| aminopeptidase p family protein | DXC44_19375 | Not Available | Positive | 4497636 - 4498796 | 42418.8 |
| glutamine-hydrolyzing gmp synthase | DXC44_19380 | Not Available | Negative | 4498953 - 4500260 | 48297.4 |
| gmp synthase (glutamine-hydrolyzing) | DXC44_19385 | Not Available | Negative | 4500299 - 4501852 | 57645.2 |
| large conductance mechanosensitive channel protein mscl | DXC44_19390 | Not Available | Negative | 4502091 - 4502531 | 15733.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

