Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_19240 | Not Available | Negative | 4469998 - 4470918 | 34929.8 |
| hypothetical protein | DXC44_19245 | Not Available | Negative | 4470969 - 4471235 | 10011.5 |
| hypothetical protein | DXC44_19250 | Not Available | Negative | 4471247 - 4471705 | 16647.6 |
| hypothetical protein | DXC44_19255 | Not Available | Negative | 4471741 - 4472394 | 24231.1 |
| duf3137 domain-containing protein | DXC44_19260 | Not Available | Negative | 4472432 - 4473460 | 39244.8 |
| lema family protein | DXC44_19265 | Not Available | Negative | 4473464 - 4474024 | 21264.9 |
| hypothetical protein | DXC44_19270 | Not Available | Negative | 4474039 - 4474746 | 26916.3 |
| duf1266 domain-containing protein | DXC44_19275 | Not Available | Negative | 4474793 - 4475821 | 38208.3 |
| ankyrin repeat domain-containing protein | DXC44_19280 | Not Available | Negative | 4475863 - 4476834 | 34651.9 |
| ankyrin repeat domain-containing protein | DXC44_19285 | Not Available | Negative | 4476845 - 4478404 | 57746.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

