Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_01725 | Not Available | Positive | 448991 - 450046 | 40754.8 |
| hypothetical protein | DXC44_01730 | Not Available | Positive | 450269 - 451606 | 52628.6 |
| hypothetical protein | DXC44_01735 | Not Available | Positive | 451590 - 453068 | 56035.2 |
| hypothetical protein | DXC44_01740 | Not Available | Positive | 453114 - 454322 | 46491.4 |
| hypothetical protein | DXC44_01745 | Not Available | Negative | 454434 - 454631 | 7695.71 |
| glycosyl transferase | DXC44_01760 | Not Available | Positive | 457219 - 458136 | 36284.2 |
| hypothetical protein | DXC44_01765 | Not Available | Positive | 458254 - 458577 | 12043.4 |
| hypothetical protein | DXC44_01770 | Not Available | Positive | 458528 - 458746 | 8341.96 |
| n-acetylmuramoyl-l-alanine amidase | DXC44_01775 | Not Available | Negative | 458888 - 459493 | 23254.9 |
| dna-binding protein | DXC44_01780 | Not Available | Negative | 459591 - 460097 | 18460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

