Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_18650 | Not Available | Positive | 4357551 - 4357925 | 14167.1 |
| hypothetical protein | DXC44_18655 | Not Available | Positive | 4357919 - 4358209 | 11841.3 |
| hypothetical protein | DXC44_18660 | Not Available | Positive | 4358166 - 4358441 | 10618.1 |
| nucleotidyltransferase domain-containing protein | DXC44_18665 | Not Available | Positive | 4358627 - 4358947 | 12470.8 |
| hepn domain-containing protein | DXC44_18670 | Not Available | Positive | 4358938 - 4359342 | 15386.6 |
| hypothetical protein | DXC44_18685 | Not Available | Positive | 4361127 - 4362049 | 35035.1 |
| Trna-met | Not Available | Not Available | Positive | 4362181 - 4362256 | Not Available |
| tetr/acrr family transcriptional regulator | DXC44_18695 | Not Available | Positive | 4362488 - 4363087 | 22662.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DXC44_18700 | Not Available | Positive | 4363119 - 4363865 | 25994.4 |
| rna pseudouridine synthase | DXC44_18705 | Not Available | Positive | 4363867 - 4364538 | 25519.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

