Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXC44_01675 | Not Available | Positive | 436109 - 436819 | 26379.0 |
| abc transporter permease | DXC44_01680 | Not Available | Positive | 436819 - 439239 | 91819.4 |
| transcriptional regulator | DXC44_01685 | Not Available | Positive | 440225 - 441058 | 32038.6 |
| nucleoside-diphosphate sugar epimerase | DXC44_01690 | Not Available | Positive | 441233 - 442441 | 45697.0 |
| legc family aminotransferase | DXC44_01695 | Not Available | Positive | 442460 - 443614 | 43283.5 |
| udp-n-acetylglucosamine 2-epimerase (hydrolyzing) | DXC44_01700 | Not Available | Positive | 443982 - 445100 | 42111.7 |
| gnat family n-acetyltransferase | DXC44_01705 | Not Available | Positive | 445173 - 446204 | 40555.9 |
| n-acetylneuraminate synthase | DXC44_01710 | Not Available | Positive | 446209 - 447207 | 36785.6 |
| acylneuraminate cytidylyltransferase family protein | DXC44_01715 | Not Available | Positive | 447223 - 447918 | 25975.1 |
| nucleotidyltransferase | DXC44_01720 | Not Available | Positive | 447924 - 448964 | 39926.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

