Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | DXC44_18330 | Not Available | Positive | 4288442 - 4289536 | 39986.6 |
| mfs transporter | DXC44_18335 | Not Available | Positive | 4289583 - 4290923 | 47498.5 |
| galactokinase | DXC44_18340 | Not Available | Positive | 4290964 - 4292118 | 42994.0 |
| galactose mutarotase | DXC44_18345 | Not Available | Positive | 4292315 - 4293469 | 41981.6 |
| sss family transporter | DXC44_18350 | Not Available | Positive | 4293496 - 4295238 | 64485.8 |
| nudix hydrolase | DXC44_18355 | Not Available | Positive | 4295314 - 4295991 | 26233.5 |
| l-ribulose-5-phosphate 4-epimerase | DXC44_18360 | Not Available | Positive | 4296062 - 4296748 | 24994.8 |
| l-arabinose isomerase | DXC44_18365 | Not Available | Positive | 4296788 - 4298317 | 57259.3 |
| atpase | DXC44_18370 | Not Available | Positive | 4298420 - 4300018 | 57732.0 |
| transketolase | DXC44_18375 | Not Available | Positive | 4300153 - 4302165 | 72436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

